Test ID: SNS
Supplemental Newborn Screen, Blood Spot
Secondary ID
A test code used for billing and in test definitions created prior to November 2011
NY State Approved
Indicates the status of NY State approval and if the test is orderable for NY State clients.
Useful For
Suggests clinical disorders or settings where the test may be helpful
Presymptomatic identification of disorders to allow for early initiation of treatment and consequent improvement in the long-term prognosis of affected patients.
Early diagnosis may also minimize complications and help avoid unnecessary diagnostic testing and identify families for whom prenatal genetic counseling may be helpful.
| Disorders detectable by amino acid, acylcarnitine, and succinylacetone profiling using MS/MS include: | ||
| Amino Acid Metabolism | Fatty Acid Metabolism | Organic Acid Metabolism |
| Argininemia | Short-chain acyl- CoA dehydrogenase (SCAD) deficiency | Glutaric academia Type I (GA-1) |
| Argininosuccinic aciduria | Medium-chain acyl-CoA dehydrogenase (MCAD) deficiency | Isovaleric acidemia |
| Citrullinemia | Mitochondrial trifunctional protein (TFP) deficiency | 3-Ketothiolase deficiency |
| Homocystinuria | Long-chain 3-hydroxy acyl-CoA dehydro genase (LCHAD) deficiency | 3-Methylcrotonyl- CoA carboxylase deficiency |
| Maple syrup urine disease (MSUD) | Very long-chain acyl-CoA dehydrogenase (VLCAD) deficiency | 3-Methyl-glutaconyl- CoA hydratase deficiency |
| Phenylketonuria and other causes of hyperphenylalaninemia | Carnitine palmitoyl- transferase deficiency Type II, (CPT-2) | Multiple carboxylase deficiency |
| Tyrosinemia Type I | Carnitine-acylcarnitine translocase (CACT) deficiency | Methylmalonic acidemias |
| Tyrosinemia Type II | Glutaric acidemia Type II (GA-2; multiple acyl- CoA dehydrogenase deficiency) 2,4-Dienoyl-CoA reductase deficiency 3-Hydroxy-3- methylglutaryl-CoA (HMG-CoA) lyase deficiency | Propionic academia
2-Methylbutyryl-CoA dehydrogenase deficiency Isobutyryl-CoA dehydrogenase deficiency |
Genetics Test Information
Provides information that may help with selection of the correct test or proper submission of the test request
Panel includes all disorders recommended by the American College of Medical Genetics (Genet Med 2006;8[Supplement]:1S-11S).
Testing Algorithm
Delineates situation(s) when tests are added to the initial order. This includes reflex and additional tests.
The following algorithms are available in Special Instructions:
-Newborn Screening Follow-up for Elevations of C8, C6, and C10 Acylcarnitines (also applies to any plasma C8, C6, and C10 acylcarnitine elevations)
-Newborn Screening Follow-up for Isolated C4 Acylcarnitine Elevations (also applies to any plasma C4 acylcarnitine elevation)
-Newborn Screening Follow-up for Isolated C5 Acylcarnitine Elevations (also applies to any plasma C5 acylcarnitine elevation)
Special Instructions and Forms
Describes specimen collection and preparation information, test algorithms, and other information pertinent to test. Also includes pertinent information and consent forms to be used when requesting a particular test
- Request for Original Newborn Screening Card
- Newborn Screening Follow-up for Isolated C4 Acylcarnitine Elevations (also applies to any plasma C4 acylcarnitine elevations)
- Newborn Screening Follow-up for Elevations of C8, C6, and C10 Acylcarnitine (also applies to any plasma C8, C6, and C10 acylcarnitine elevations)
- Newborn Screening Follow-up for Isolated C5 Acylcarnitines Elevations (also applies to any plasma C5 acylcarnitine elevation)
Method Name
A short description of the method used to perform the test
Tandem Mass Spectrometry (MS/MS)
Reporting Name
A shorter/abbreviated version of the Published Name for a test; an abbreviated test name
Aliases
Lists additional common names for a test, as an aid in searching
Expanded Newborn Screen, Blood Spot
Newborn Screen
Newborn Screening
Newborn Supplemental Screen, Blood Spot
Specimen Type
Describes the specimen type needed for testing
Specimen Required
Defines the optimal specimen. This field describes the type of specimen required to perform the test and the preferred volume to complete testing. The volume allows automated processing, fastest throughput and, when indicated, repeat or reflex testing.
Patient must be >24 hours and <1 week of age. A repeat specimen is required within 1 week of birth for infants <24 hours old.
Container/Tube:
Preferred: Supplemental Newborn Screening Card (Supply T493)
Acceptable: Whatman Protein Saver 903 Paper and Ahlstrom 226 filter paper
Specimen Volume: 5 blood spots
Collection Instructions:
1. Let blood dry on the filter paper at ambient temperature in a horizontal position for 3 hours.
2. Do not expose specimen to heat or direct sunlight.
3. Do not stack wet specimens.
4. Do not use devices or capillary tubes.
5. Keep specimen dry.
Additional Information: Patient education brochures in English (Supply T523) and Spanish (Supply T535) are available upon request.
Specimen Minimum Volume
Defines the amount of specimen required to perform an assay once, including instrument and container dead space. Submitting the minimum specimen volume makes it impossible to repeat the test or perform confirmatory or perform reflex testing. In some situations, a minimum specimen volume may result in a QNS (quantity not sufficient) result, requiring a second specimen to be collected.
Reject Due To
Identifies specimen types and conditions that may cause the specimen to be rejected
| Hemolysis | NA |
| Lipemia | NA |
| Icterus | NA |
| Other | NA |
Specimen Stability Information
Provides a description of the temperatures required to transport a specimen to the laboratory. Alternate acceptable temperature(s) are also included.
| Specimen Type | Temperature | Time |
|---|---|---|
| Whole blood | Ambient (preferred) | |
| Frozen | ||
| Refrigerated | ||
Clinical Information
Discusses physiology, pathophysiology, and general clinical aspects, as they relate to a laboratory test
Newborn screening as a public health measure was initiated in the early 1960s for the identification of infants affected with phenylketonuria (PKU). Since then, additional genetic and nongenetic conditions were included in state screening programs. The goal of newborn screening is to detect diagnostic markers of the selected disorders in blood spots collected from presymptomatic newborns. Inherited disorders of amino acid, fatty acid, and organic acid metabolism typically manifest during the first 2 years of life as acute metabolic crises and usually result in severe neurologic impairment or death. These metabolic decompensations are usually triggered by intermittent febrile illness, such as common viral infections leading to prolonged fasting and increased energy demands. Early identification of affected newborns allows for early initiation of treatment to avoid mortality, morbidity and disabilities due to these disorders.
Tandem mass spectrometry (MS/MS) is a powerful multianalyte screening method, which is ideally suited for population-wide testing. Since the early 1990s, MS/MS has made possible the screening for more than 30 genetic disorders affecting the metabolism of amino acids, fatty acids and organic acids based on the profiling of amino acids and acylcarnitines in blood spots. In Mayo’s experience, the combined incidence of the disorders identifiable by MS/MS in a single blood spot analysis is approximately 1 in 1,600 newborns.
The Secretary’s Advisory Committee on Heritable Disorders in Newborns and Children (SACHDNC) recommends 31 disorders to be screened for by all programs (available at http://www.hrsa.gov/advisorycommittees/mchbadvisory/heritabledisorders/index.html). These conditions are considered to fulfill 3 basic principles:
-Condition is identifiable at a period of time (24 to 48 hours after birth) at which it would not ordinarily be clinically detected.
-Test with appropriate sensitivity and specificity is available.
-Demonstrated benefits of early detection, timely intervention, and efficacious treatment.
In acknowledgement of the fact that screening tests do not primarily determine disease status, but measure analytes which in most cases are not specific for a particular disease, the ACMG report includes 26 conditions which did not meet all 3 selection criteria but are identified nevertheless because most of them are included in the differential diagnosis of screening results observed in core conditions (Table 1). Although these conditions do not meet all three selection criteria, the possibility of making the diagnosis early in life not only helps to avoid unnecessary diagnostic testing, but is also beneficial to the patient's families because genetic counseling and prenatal diagnosis can be offered for subsequent pregnancies.
Supplemental newborn screening by MS/MS as described here does not replace current state screening programs, because MS/MS does not allow primary screening for galactosemia, congenital hypothyroidism, congenital adrenal hyperplasia (CAH), cystic fibrosis, biotinidase, sickle cell disease, severe combined immune deficiency (SCID), critical congenital heart disease, and congenital hearing loss.
The simultaneous MS/MS analysis of amino acids, acylcarnitines, and succinylacetone in dried blood spots can be performed in 3 minutes per specimen, generating metabolite profiles that allow for the biochemical diagnosis of multiple disorders. This is in contrast to conventional screening techniques traditionally based on the principle of 1 separate test for each disorder. The performance of Mayo's supplemental newborn screening program is characterized by a very low false-positive rate of 0.075% and a high positive predictive value of 46%.
Reference Values
Describes reference intervals and additional information for interpretation of test results. May include intervals based on age and sex when appropriate. Intervals are Mayo-derived, unless otherwise designated. If an interpretive report is provided, the reference value field will state this.
Not applicable
Interpretation
Provides information to assist in interpretation of the test results
The quantitative measurements of the various amino acids, acylcarnitines, and succinylacetone support the interpretation of the complete profile but for the most part are not diagnostic by themselves. The interpretation is by pattern recognition. Abnormal results are not sufficient to conclusively establish a diagnosis of a particular disease. To verify a preliminary diagnosis, independent biochemical (ie, in vitro enzyme assay) or molecular genetic analyses are required, many of which are offered within the Department of Laboratory Medicine and Pathology Division of Laboratory Genetics.
The reports will be in text form only, values for the more than 60 analytes and analyte ratios will not be provided. A report for a normal screening result will be reported as: "In this blood spot sample, the amino acid and acylcarnitine profiles by tandem mass spectrometry showed no biochemical evidence indicative of an underlying metabolic disorder."
A report for an abnormal screening result will include a quantitative result of the abnormal metabolites, a detailed interpretation of the results, including an overview of the results' significance, possible differential diagnoses, recommendations for additional biochemical testing and confirmatory studies (enzyme assay, molecular analysis), a phone number for one of the contacts at the Mayo Clinic, and a phone number for one of the laboratory directors if the referring physician has additional questions.
Cautions
Discusses conditions that may cause diagnostic confusion, including improper specimen collection and handling, inappropriate test selection, and interfering substances
Testing is only appropriate for patients <1 week of age as part of prospective newborn screening.
This test is supplemental and not intended to replace state mandated newborn screening.
Test is not appropriate for metabolic screening of symptomatic patients.
In a few instances, falsely abnormal results may occur in the analysis of amino acid and acylcarnitine profiles. To keep the number of false-positive and false-negative results to a minimum, results are interpreted based on the metabolite profiles, the information provided on the newborn screening card, and second tier tests for several nonspecific analytes. Using this approach our false-positive rate is only 0.075%.
Newborns discharged on the first day of life will need to be retested during the first week of life, eg, at the first well-child examination, as is customary for state-mandated newborn screening programs. This is necessary to avoid false-negative amino acid results due to limited protein intake on the first day of life.
Carrier status (heterozygosity) for inborn errors of metabolism cannot be reliably detected by amino acid and acylcarnitine profiling.
Supportive Data
The performance of Mayo's supplemental newborn screening program is characterized by a very low false-positive rate of 0.072% (cumulative for 2004-2011; 2011 YTD is 0.055%) and a high positive predictive value of 47% (2011 YTD 49%). The positive detection rate is 1 affected case in 1,583 babies screened (n=505,017).
Clinical Reference
Provides recommendations for further in-depth reading of a clinical nature
1. Matern D:Tandem mass spectrometry in newborn screening. Endocrinologist 2002;12:50-57
2. Rinaldo P, Tortorelli S, Matern D:Recent developments and new applications of tandem mass spectrometry in newborn screening. Curr Op Peditr 2004;16:427-433
3. Rinaldo P, Zafari S, Tortorelli S, Matern D:Making the case for objective performing metrics in newborn screening by tandem mass spectrometry. MRDD Res Rev 2006;12:255-261
4. Matern D, Tortorelli S, Oglesbee D, et al:Reduction of the false-positive rate in newborn screening by implementation of MS/MS-based second-tier tests:The Mayo Clinic experience (2004-2007). J Inherit Metab Dis 2007;30(4):585-592
Method Description
Describes how the test is performed and provides a method-specific reference
In the United States, every newborn undergoes state-mandated screening on the second day of life or before leaving the hospital. Blood is from a heel prick is dripped on a filter paper card. The blood is left to dry before sending the filter paper card along with pertinent demographic information to the screening laboratory.
Blood for the supplemental newborn screening is collected in the same way and then sent to the Biochemical Genetics Laboratory, after obtaining parental consent. A 3/16-inch disk is punched out of the blood spot onto 96-well plate. Then, the amino acids and acylcarnitines are extracted by the addition of methanol and known concentrations of isotopically labeled amino acids and acylcarnitines as internal standards. The extract is moved to another 96-well plate, dried under a stream of nitrogen, and derivatized by the addition of n-butanol hydrochloric acid. In a parallel process, succinylacetone is extracted from the residual blood spot, derivatized with an acidic hydrazine solution, evaporated and combined with the amino acid and acylcarnitine extract amino acids and acylcarnitines are measured as their butyl esters with the hydrazone derivative of succinylacetone by electrospray MS/MS. The concentrations of the analytes are established by computerized comparison of ion intensities of these analytes to that of the respective internal standards.(Chace DH, Naylor EW: Expansion of newborn screening programs using automated tandem mass spectrometry. MRDD Res Rev 1999;5:150-154; Turgeon C, Magera MJ, Allard P, et al: Combined newborn screening for succinylacetone, amino acids, and acylcarnitines in dried blood spots. Clin Chem 2008 Apr;54[4]:657-664)
Day(s) and Time(s) Test Performed
Outlines the days and times the test is performed. This field reflects the day and time the sample must be in the testing laboratory to begin the testing process and includes any specimen preparation and processing time required before the test is performed. Some tests are listed as continuously performed, which means assays are performed several times during the day.
Monday through Friday; 11 a.m. and 2 p.m., Saturday; 2 p.m.
Analytic Time
Defines the amount of time it takes the laboratory to setup and perform the test. This is defined in number of days. The shortest interval of time expressed is "same day/1 day," which means the results may be available the same day that the sample is received in the testing laboratory. One day means results are available 1 day after the sample is received in the laboratory.
Maximum Laboratory Time
Defines the maximum time from specimen receipt at Mayo Medical Laboratories until the release of the test result
Specimen Retention Time
Outlines the length of time after testing that a specimen is kept in the laboratory before it is discarded
Performing Laboratory Location
The location of the laboratory that performs the test
Test Classification
Provides information regarding the medical device classification for laboratory test kits and reagents. Tests may be classified as cleared or approved by the US Food and Drug Administration (FDA) and used per manufacturer's instructions, or as products that do not undergo full FDA review and approval, and are then labeled as an Analyte Specific Reagent (ASR), Investigation Use Only (IUO) product, or a Research Use Only (RUO) product.
CPT Code Information
Provides guidance in determining the appropriate Current Procedural Terminology (CPT) code(s) information for each test or profile. The listed CPT codes reflect Mayo Medical Laboratories interpretation of CPT coding requirements. It is the responsibility of each laboratory to determine correct CPT codes to use for billing.
83788
LOINC® Code Information
Provides guidance in determining the Logical Observation Identifiers Names and Codes (LOINC) values for the result codes returned for this test or profile.
| Result ID | Reporting Name | LOINC Code |
|---|---|---|
| 23723 | Specimen ID | N/A |
| 82594 | Supplemental Newborn Screen Result | In Process |
| 23726 | Amendment | In Process |
| 23727 | Reviewed By | In Process |
| 23728 | Release Date | N/A |


