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The detection of the Kallmann syndrome deletion is based on FISH
analysis of the critical region (KAL) on the short arm of the X
chromosome (Xp22.3). Metaphase cells are examined for the presence
of the critical region loci at Xp22.3 (orange signal) and the control
probe at the X centromere (green signal). In metaphase cells with a
deletion, the abnormal (deleted) X will exhibit only a control probe
signal, while signals for both the critical region and control probes
will be present on the normal X homolog in males and on both X
chromosomes in females. (Crifasi PA, Michels VV, Driscoll DJ,
et al: DNA fluorescent probes for diagnosis of velocardiofacial
and related syndromes. Mayo Clin Proc 1995 Dec;195[70]:
1148-1153)

